Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX479673: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-322691' containing sample 'TKK_03_0083'
2 ILLUMINA (Illumina HiSeq 2000) runs: 3.4M spots, 688.5M bases, 315.8Mb downloads

UUID: d454bb34-8e34-42ca-85ad-16b43e6c8d0e

Design: Illumina sequencing of Mycobacterium tuberculosis TKK_03_0083 via random selection

Submitted by: Broad Institute (BI)

Study: TB-ARC - KRITH 2

PRJNA235426 • SRP039187 • All experiments • All runs

Sample:

SAMN02585916 • SRS565023 • All experiments • All runs

Organism: Mycobacterium tuberculosis TKK_03_0083

Library:

Name: Pond-322691

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 12 attributes...) (hide...)

analysis_type: AssemblyWithReference

gssr_id: 481182.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5EVFK

material_type: DNA:DNA Somatic

product_order: PDO-2814

product_part_number: P-MCV-0004

project: G58059

research_project: RP-114

root_sample_id: SM-4P5B9

sample_id: SM-5EVFK

work_request: 39951

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-26 09:39:52.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 3.4M spots, 688.5M bases, 315.8Mb

Run	# of Spots	# of Bases	Size	Published
SRR1180398	1,712,321	345.9M	158.1Mb	2014-03-01
SRR1180418	1,696,204	342.6M	157.7Mb	2014-03-01

ID:: 669107

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